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matrix-eqtl  (MathWorks Inc)


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    MathWorks Inc matrix-eqtl
    Matrix Eqtl, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/matrix+eqtl/10__3390_slash_sym13112168-88-0-13
    Average 90 stars, based on 1 article reviews
    matrix-eqtl - by Bioz Stars, 2026-09
    90/100 stars

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    Article Title: Matrix eQTL: ultra fast eQTL analysis via large matrix operations
    Article Snippet: Dividing the best theoretically possible time by the time observed in practice, we get the lower bound on the efficiency of Matrix eQTL implementations: 63% for R and 78% for Matlab.



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    Estimated performance of various eQTL software on the CF dataset

    Journal: Bioinformatics

    Article Title: Matrix eQTL: ultra fast eQTL analysis via large matrix operations

    doi: 10.1093/bioinformatics/bts163

    Figure Lengend Snippet: Estimated performance of various eQTL software on the CF dataset

    Article Snippet: Matrix eQTL (Matlab) , 11.8 , 11.8 , minutes.

    Techniques: Software

    Estimated performance of various eQTL software on the CF dataset

    Journal: Bioinformatics

    Article Title: Matrix eQTL: ultra fast eQTL analysis via large matrix operations

    doi: 10.1093/bioinformatics/bts163

    Figure Lengend Snippet: Estimated performance of various eQTL software on the CF dataset

    Article Snippet: This did not allow us to make precise estimates of its performance, so we applied Matrix eQTL to the whole dataset and reported the performance in . table ft1 table-wrap mode="anchored" t5 Table 1. caption a7 Method\No. of covariates Zero Ten Plink 9.4 583.3 days Merlin 19.6 20.0 days R/qtl (Revolution R) 1.0 4.7 days snpMatrix 3.2 5.1 days eMap 17.8 N/A days FastMap 10.3 N/A hours Matrix eQTL (Matlab) 11.8 11.8 minutes Matrix eQTL (Revolution R) 14.6 14.6 minutes Matrix eQTL (R, Goto BLAS) 19.4 19.4 minutes Open in a separate window The time for all methods is projected from tests on a dataset with 2201 genes and 57 333 SNPs.

    Techniques: Software